Protein ZmALF9
ZmALF9 is a protein in the Alfin-like family.
Information
TF Name: ZmALF9
Species: Maize
TF Family: Alfin-like
Gene Name(Synonym): ALF9
Uniprot ID: B4FK95

Protein ZmALF9

ZmALF9 is a protein in the Alfin-like family.

Overview of domains present in v5 transcripts
Alfin-likePF00628PF12165
Zm00001eb353930_T002
Zm00001eb353930_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d010834DAPseq no logo sequence fimo position
Zm00001d010834DAPseq no logo sequence fimo position
Zm00001d010834ChIPseq no logo sequence fimo position
Zm00001d010834PChIPseq no logo sequence fimo position

Interactions where ZmALF9 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmALF9 is the target  
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There are 53 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb353930_T002 from maize genome v5

Amino Acid Sequence
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MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF12165
PF00628
Alfin-like
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Nucleotide Sequence
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ACGCAAGATCTTGCACTGTTGCACA...

GRMZM2G017142_T01 from maize genome v3


Related TFome: pUT1436

Amino Acid Sequence
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MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

Nucleotide Sequence
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ACCCGTCCGGGTGTACCGGTGTACT...

GRMZM2G017142_T02 from maize genome v3

Amino Acid Sequence
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MNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNGGRNKLSVKQTS
EPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYKCPSCCNSKRPR
PI

Nucleotide Sequence
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ACCCGTCCGGGTGTACCGGTGTACT...

GRMZM2G017142_T03 from maize genome v3

Amino Acid Sequence
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MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRGWI

Nucleotide Sequence
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ACCCGTCCGGGTGTACCGGTGTACT...

GRMZM2G017142_T04 from maize genome v3

Amino Acid Sequence
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MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKVTRTHRCFYHIFYCHVMMLNLICLSSKQASHD

Nucleotide Sequence
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ACCCGTCCGGGTGTACCGGTGTACT...

Zm00001d010834_T001 from maize genome v4

Amino Acid Sequence
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MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

Nucleotide Sequence
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AAAAAAAAGAAACGCAAGATCTTGC...

Zm00001d010834_T002 from maize genome v4

Amino Acid Sequence
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MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKQTSEPRLENNAREPDEGYDEDDSNHSETLCGTCGGIYSADEFWIGCDVCEKWYHGKCVKITPAKAESIKQYK
CPSCCNSKRPRPI

Nucleotide Sequence
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GGTGTACTATCATCCCTCGGCTCCA...

Zm00001d010834_T003 from maize genome v4

Amino Acid Sequence
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MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRYDTIPSLPVSPAVTSASWCAVCAH

Nucleotide Sequence
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GTACTATCATCCCTCGGCTCCAGGC...

Zm00001eb353930_T001 from maize genome v5

Amino Acid Sequence
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MDASYRRAGTGSGSAPRSVEDIYKDYRSRRSAILRALTHDVEEFYALCDPEKENLCLYGYANEAWEVALPAEEVPTELPE
PALGINFARDGMNRGDWLALVAVHSDSWLVSVAFYYAARLNRSDRKRLFGMMNDLPTVFEVVSSGVKQSKERDRSGTDNG
GRNKLSVKVTRTHRCFYHIFYCHVMMLNLICLSSKQASHD

Nucleotide Sequence
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ACGCAAGATCTTGCACTGTTGCACA...


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